STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107572784LETM1 domain-containing protein 1-like. (362 aa)    
Predicted Functional Partners:
Eif2d
Eukaryotic translation initiation factor 2D.
   
    0.569
ENSSGRP00000112722
Eukaryotic translation initiation factor 2D.
   
    0.569
ENSSGRP00000005478
Praja ring finger ubiquitin ligase 2.
    
 
 0.532
LOC107581629
Delta-1-pyrroline-5-carboxylate synthase-like.
      
 0.509
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
      
 0.509
LOC107601482
UBX domain-containing protein 1-like.
      
 0.493
ubxn1
UBX domain-containing protein 1/4.
      
 0.493
ENSSGRP00000010903
annotation not available
      
 0.479
rpl14
Large subunit ribosomal protein L14e.
      
 0.479
dnajc10
DnaJ homolog subfamily C member 10.
    
 
 0.451
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.