STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107572785CD63 antigen-like. (237 aa)    
Predicted Functional Partners:
LOC107560251
Lysosome-associated membrane glycoprotein 2-like.
    
 0.872
LOC107550762
Lysosome-associated membrane glycoprotein 2-like.
    
 0.872
LOC107600376
Ras-related protein Rab-27A-like.
     
 0.719
ENSSGRP00000090475
annotation not available
     
 0.719
ENSSGRP00000028703
Lysosome-associated membrane glycoprotein 1-like.
   
 0.710
ENSSGRP00000048953
Lysosome-associated membrane glycoprotein 1-like.
   
 0.710
LOC107579798
CD9 antigen-like isoform X1.
  
 
0.696
LOC107563270
Ras-related protein Rab-27B-like isoform X1.
     
 0.694
ENSSGRP00000097579
Ras-related protein Rab-27B-like.
     
 0.694
LOC107559685
CD9 antigen-like.
   
 
0.683
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.