STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107564174Protein tweety homolog 3. (567 aa)    
Predicted Functional Partners:
fam189a2
Protein FAM189A2 isoform X1.
      
 0.588
pacc1
Transmembrane protein 206.
    
 
 0.553
gna12
Guanine nucleotide-binding protein subunit alpha-12.
      
 0.549
LOC107568395
Volume-regulated anion channel subunit LRRC8E-like.
      
 0.414
LOC107585666
Volume-regulated anion channel subunit LRRC8D-like.
      
 0.414
LOC107573976
Volume-regulated anion channel subunit LRRC8E-like isoform X1.
      
 0.414
ENSSGRP00000018656
annotation not available
      
 0.414
ENSSGRP00000091342
Volume-regulated anion channel subunit LRRC8D-like.
      
 0.414
LOC107589846
Volume-regulated anion channel subunit LRRC8D-like.
      
 0.414
LOC107587658
Volume-regulated anion channel subunit LRRC8A-like.
      
 0.412
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.