STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107579628Cdc42 effector protein 1-like. (162 aa)    
Predicted Functional Partners:
ENSSGRP00000004211
annotation not available
    
 0.448
cdc42
Cell division control protein 42 homolog isoform X1.
    
 0.448
ENSSGRP00000079890
Cell division control protein 42 homolog isoform X1.
    
 0.448
ENSSGRP00000004820
Rho-related GTP-binding protein RhoG-like.
    
 0.427
ENSSGRP00000019066
Ras homolog family member Gb.
    
 0.427
LOC107557087
Rho-related GTP-binding protein RhoG-like isoform X1.
    
 0.427
ENSSGRP00000059662
Rho-related GTP-binding protein RhoG-like.
    
 0.427
LOC107596156
Rho-related GTP-binding protein RhoG-like.
    
 0.427
LOC107580157
Cdc42 homolog.
    
 0.417
LOC107552852
Cell division control protein 42 homolog isoform X1.
    
 0.417
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.