STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107593329Chromatin assembly factor 1 subunit A-like. (857 aa)    
Predicted Functional Partners:
CHAF1B
Chromatin assembly factor 1 subunit B-like.
   
 
 0.964
ENSSGRP00000049085
Chromatin assembly factor 1 subunit B-like.
   
 
 0.964
pola1
DNA polymerase alpha catalytic subunit.
   
 
 0.870
ENSSGRP00000105877
DNA polymerase alpha catalytic subunit-like.
   
 
 0.870
LOC107584269
Histone-binding protein RBBP4.
   
 
 0.861
LOC107562083
Histone-binding protein RBBP4.
   
 
 0.861
LOC107602791
Histone-binding protein RBBP7-like isoform X1.
   
 
 0.861
LOC107568807
Histone-binding protein RBBP4.
   
 
 0.861
ENSSGRP00000017699
Proliferating cell nuclear antigen.
   
 
 0.827
LOC107583397
Proliferating cell nuclear antigen.
   
 
 0.827
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.