STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004368Eukaryotic translation initiation factor 3, subunit Bb. (588 aa)    
Predicted Functional Partners:
FAU
Small subunit ribosomal protein S30e.
   
 0.995
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.995
LOC107571764
Eukaryotic translation initiation factor 3 subunit C-like isoform X1.
   
 0.995
LOC107567395
Small subunit ribosomal protein S30e.
   
 0.995
LOC107562013
Eukaryotic translation initiation factor 3 subunit C isoform X1.
   
 0.995
LOC107555153
Small subunit ribosomal protein S30e.
   
 0.995
LOC107602127
Eukaryotic translation initiation factor 3 subunit M.
   
 0.989
LOC107576263
Eukaryotic translation initiation factor 3 subunit M-like.
   
 0.989
Eif3a
Eukaryotic translation initiation factor 3 subunit A.
   
 0.988
ENSSGRP00000024024
annotation not available
   
 0.988
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.