STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004402Ras-related protein Rab-8A-like. (117 aa)    
Predicted Functional Partners:
ENSSGRP00000039857
MICAL-like protein 2 isoform X1.
    
 0.925
ENSSGRP00000078959
Ras-related protein Rab-8A-like.
  
  
 
0.900
rab3ip
Rab-3A-interacting protein isoform X1.
    
 0.885
LOC107554773
Rab-3A-interacting protein-like.
    
 0.885
wdr41
WD repeat-containing protein 41 isoform X1.
     
 0.809
LOC107564620
Smith-Magenis syndrome chromosomal region candidate gene 8-B protein homolog.
    
 0.806
LOC107585127
Rab GDP dissociation inhibitor beta-like.
   
 0.787
LOC107560716
Ankyrin repeat and SOCS box protein 13-like.
   
 0.787
ENSSGRP00000023925
GDP dissociation inhibitor 1.
   
 0.787
LOC107564645
Rab GDP dissociation inhibitor alpha.
   
 0.787
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.