STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107570321Prostaglandin E synthase 3-like isoform X1. (159 aa)    
Predicted Functional Partners:
LOC107587481
Microsomal prostaglandin-E synthase 1.
     
 0.943
LOC107600004
Microsomal prostaglandin-E synthase 2.
     
 0.943
LOC107602856
Microsomal prostaglandin-E synthase 2.
     
 0.943
ptgis
Prostacyclin synthase.
     
 0.924
LOC107564074
Stress-induced-phosphoprotein 1-like.
   
 0.923
LOC107571522
Stress-induced-phosphoprotein 1-like.
   
 0.923
LOC107559817
Thromboxane-A synthase-like.
   
 
 0.916
LOC107587020
Thromboxane-A synthase-like.
   
 
 0.916
ENSSGRP00000037894
Serine/threonine-protein phosphatase 5.
    
 0.914
ppp5c
Serine/threonine-protein phosphatase 5.
    
 0.914
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.