STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004439annotation not available (392 aa)    
Predicted Functional Partners:
ENSSGRP00000063317
Tachykinin precursor 3b.
  
     0.525
ENSSGRP00000015274
Kinetochore-associated protein 1-like.
      
 0.522
ENSSGRP00000001960
Tachykinin precursor 3b.
  
     0.520
snapc3
SnRNA-activating protein complex subunit 3.
      
 0.489
ENSSGRP00000090636
annotation not available
  
     0.481
ENSSGRP00000070549
annotation not available
  
   
 0.473
LOC107551257
DnaJ homolog subfamily C member 30-like.
      
 0.463
ENSSGRP00000097759
annotation not available
  
     0.457
LOC107569146
DnaJ homolog subfamily C member 28-like.
      
 0.453
ENSSGRP00000077911
LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 28-like.
      
 0.453
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.