STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004463Neurotrophic tyrosine kinase, receptor type 3. (397 aa)    
Predicted Functional Partners:
NGF
Nerve growth factor, beta.
    
 0.839
LOC107566067
Nerve growth factor, beta.
    
 0.839
LOC107595107
Brain-derived neurotrophic factor isoform X1.
   
 0.831
LOC107554201
Nerve growth factor, beta.
    
 0.766
LOC107579734
Neurotrophin-3-like.
    
 0.737
LOC107584056
Neurotrophin-3-like.
    
 0.737
ENSSGRP00000047289
Tumor necrosis factor receptor superfamily member 16-like.
   
 0.697
ENSSGRP00000023124
Uncharacterized protein LOC107551163.
    
 0.670
LOC107563977
Uncharacterized protein LOC107563977.
    
 0.670
ENSSGRP00000023138
annotation not available
   
 0.669
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.