STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF4Protein YIPF4-like. (193 aa)    
Predicted Functional Partners:
LOC107559776
Protein YIPF3.
   
 
 0.846
yipf3
Protein YIPF3.
   
 
 0.846
LOC107601236
Protein YIPF1-like.
   
 
 0.829
ENSSGRP00000109728
Yip1 domain family, member 2.
   
 
 0.829
ENSSGRP00000006598
annotation not available
   
 
 0.817
yif1a
Protein transport protein YIF1.
   
 
 0.817
ENSSGRP00000071727
Yip1 interacting factor homolog A (S. cerevisiae).
   
 
 0.817
LOC107566288
Protein transport protein YIF1.
   
 
 0.765
ENSSGRP00000093777
Protein transport protein YIF1.
   
 
 0.765
ENSSGRP00000093778
annotation not available
   
 
 0.765
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.