STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107551564Translation machinery-associated protein 16-like. (194 aa)    
Predicted Functional Partners:
LOC107567003
Nucleolar GTP-binding protein 1-like.
   
 
 0.919
gtpbp4
Nucleolar GTP-binding protein 1.
   
 
 0.919
rpf2
Ribosome production factor 2 homolog.
   
  
 0.891
ENSSGRP00000044344
RRP15-like protein isoform X1.
   
  
 0.885
znf593
Bud site selection protein 20.
   
 
 0.875
ENSSGRP00000034693
60S ribosomal export protein NMD3-like.
   
 
 0.864
ENSSGRP00000017087
RNA polymerase I and III subunit D.
   
    0.856
ENSSGRP00000075053
CD3e molecule, epsilon associated protein.
   
    0.855
utp11
Probable U3 small nucleolar RNA-associated protein 11.
   
    0.854
ENSSGRP00000020134
annotation not available
   
 
 0.838
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.