STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107580569Reactive oxygen species modulator 1-like. (79 aa)    
Predicted Functional Partners:
ENSSGRP00000012525
Ubiquinol-cytochrome c reductase subunit 9.
   
  
 0.830
LOC107585396
Ubiquinol-cytochrome c reductase subunit 9.
   
  
 0.830
Ndufb9
LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9.
   
  
 0.817
LOC107573602
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.816
LOC107594238
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like.
   
   0.816
LOC107554835
Ubiquinol-cytochrome c reductase subunit 8.
   
  
 0.808
ENSSGRP00000050338
annotation not available
   
  
 0.808
LOC107597749
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like.
   
  
 0.779
LOC107595221
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like.
   
  
 0.779
NDUFA13
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like isoform X1.
   
  
 0.766
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.