STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107593332Semaphorin-4E-like. (796 aa)    
Predicted Functional Partners:
PTPRC
Receptor-type tyrosine-protein phosphatase C-like.
    
 0.696
PTPRC-2
Protein tyrosine phosphatase receptor type C.
    
 0.696
ENSSGRP00000007186
Plexin-B2-like.
    
 0.693
ENSSGRP00000025880
Plexin-B2-like.
    
 0.693
ENSSGRP00000035917
Plexin-B2-like.
    
 0.693
ENSSGRP00000037218
annotation not available
    
 0.693
LOC107586348
Plexin-B1-like isoform X1.
    
0.693
ENSSGRP00000043915
Plexin-B1-like.
    
 0.693
ENSSGRP00000066931
Plexin-B3-like.
    
 0.693
ENSSGRP00000077351
Plexin-B1-like isoform X1.
    
 0.693
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.