STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107579943Protein TANC1-like. (135 aa)    
Predicted Functional Partners:
ENSSGRP00000056176
Ras association domain family member 3.
      
 0.628
LOC107597248
Serine/threonine-protein phosphatase 6 catalytic subunit.
    
 0.603
LOC107587376
Serine/threonine-protein phosphatase 6 catalytic subunit-like.
    
 0.603
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.588
ift52
Intraflagellar transport protein 52 homolog.
    
 0.552
Ikbkb
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.539
skp1
S-phase kinase-associated protein 1 isoform X1.
   
 0.513
LOC107601877
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.508
ENSSGRP00000024973
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like.
    
  0.508
ENSSGRP00000026177
RNA binding motif protein 28.
   
 
 0.508
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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