Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000004697Teashirt homolog 2-like. (237 aa)    
Predicted Functional Partners:
ENSSGRP00000020384
ISY1 splicing factor homolog.
      
 0.549
ENSSGRP00000069344
Pre-mRNA-splicing factor ISY1 homolog.
      
 0.549
ENSSGRP00000017046
Homeobox protein Meis2-like.
    
 0.544
ENSSGRP00000041400
Meis homeobox 2a.
    
 0.544
ENSSGRP00000041939
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
      
 0.535
LOC107589732
Tsukushi (leucine-rich repeat-containing protein 54).
      
 0.535
ENSSGRP00000023569
GTP-binding protein YPT31/YPT8-like.
      
 0.445
ENSSGRP00000023570
annotation not available
      
 0.445
ENSSGRP00000047179
Ras-related protein Rab-19-like.
      
 0.445
LOC107561147
Ras-related protein Rab-19-like.
      
 0.445
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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