STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107584114Inactive rhomboid protein 1-like isoform X1. (860 aa)    
Predicted Functional Partners:
LOC107581734
Phosphoribosyl pyrophosphate synthase-associated protein 2.
     
 0.602
LOC107584116
[phosphatase 2A protein]-leucine-carboxy methyltransferase.
      
 0.585
ENSSGRP00000069303
Leucine carboxyl methyltransferase 1.
      
 0.585
ENSSGRP00000026203
Disintegrin and metalloproteinase domain-containing protein 17-like.
    
 0.541
LOC107549102
Disintegrin and metalloproteinase domain-containing protein 17-like isoform X1.
    
 0.541
LOC107601850
Disintegrin and metalloproteinase domain-containing protein 17-like isoform X1.
    
 0.541
ENSSGRP00000102835
ADAM metallopeptidase domain 17a.
    
 0.541
mthfs
5-formyltetrahydrofolate cyclo-ligase isoform X1.
  
    0.523
ENSSGRP00000102383
annotation not available
  
    0.523
ENSSGRP00000036184
KN motif and ankyrin repeat domain-containing protein 2-like.
      
 0.502
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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