STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107577521High affinity choline transporter 1-like. (341 aa)    
Predicted Functional Partners:
LOC107581629
Delta-1-pyrroline-5-carboxylate synthase-like.
     
 0.654
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.654
LOC107569511
Probable vesicular acetylcholine transporter-B.
   
  
 0.652
ENSSGRP00000047248
Proline dehydrogenase (oxidase) 1b.
  
  
 0.580
LOC107562014
Probable proline dehydrogenase 2.
  
  
 0.580
LOC107585438
Proline dehydrogenase 1, mitochondrial-like.
  
  
 0.580
ENSSGRP00000081075
Proline dehydrogenase (oxidase) 1b.
  
  
 0.580
ENSSGRP00000002646
T-cell immunoglobulin and mucin domain-containing protein 4-like isoform X1.
   
  
 0.513
ENSSGRP00000024681
Hepatitis A virus cellular receptor 1.
   
  
 0.513
LOC107560975
SET domain-containing protein 4-like.
   
  
 0.504
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.