ENSSGRP00000004886 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000004886

annotation not available (65 aa)

Predicted Functional Partners:

ENSSGRP00000008625

0.483

ENSSGRP00000080887

0.483

LOC107551792

0.467

LOC107572939

0.464

ENSSGRP00000106624

0.460

ENSSGRP00000100179

0.459

ENSSGRP00000101767

0.457

ENSSGRP00000056911

0.456

ENSSGRP00000035466

0.443

ENSSGRP00000034530

0.439

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004886	ENSSGRP00000008625	ENSSGRP00000004886	ENSSGRP00000008625	annotation not available	Dystrophia myotonica-protein kinase.	0.483
ENSSGRP00000004886	ENSSGRP00000034530	ENSSGRP00000004886	ENSSGRP00000034530	annotation not available	annotation not available	0.439
ENSSGRP00000004886	ENSSGRP00000035466	ENSSGRP00000004886	ENSSGRP00000035466	annotation not available	Protein FAM19A2-like.	0.443
ENSSGRP00000004886	ENSSGRP00000056911	ENSSGRP00000004886	ENSSGRP00000056911	annotation not available	Si:ch211-254n4.3.	0.456
ENSSGRP00000004886	ENSSGRP00000080887	ENSSGRP00000004886	ENSSGRP00000080887	annotation not available	Dystrophia myotonica-protein kinase.	0.483
ENSSGRP00000004886	ENSSGRP00000100179	ENSSGRP00000004886	ENSSGRP00000100179	annotation not available	annotation not available	0.459
ENSSGRP00000004886	ENSSGRP00000101767	ENSSGRP00000004886	ENSSGRP00000101767	annotation not available	Neurexophilin 2a.	0.457
ENSSGRP00000004886	ENSSGRP00000106624	ENSSGRP00000004886	ENSSGRP00000106624	annotation not available	Neurexophilin-2-like isoform X1.	0.460
ENSSGRP00000004886	LOC107551792	ENSSGRP00000004886	ENSSGRP00000096322	annotation not available	Neurexophilin-2-like.	0.467
ENSSGRP00000004886	LOC107572939	ENSSGRP00000004886	ENSSGRP00000009690	annotation not available	Neurexophilin-2-like.	0.464
ENSSGRP00000008625	ENSSGRP00000004886	ENSSGRP00000008625	ENSSGRP00000004886	Dystrophia myotonica-protein kinase.	annotation not available	0.483
ENSSGRP00000034530	ENSSGRP00000004886	ENSSGRP00000034530	ENSSGRP00000004886	annotation not available	annotation not available	0.439
ENSSGRP00000035466	ENSSGRP00000004886	ENSSGRP00000035466	ENSSGRP00000004886	Protein FAM19A2-like.	annotation not available	0.443
ENSSGRP00000035466	ENSSGRP00000100179	ENSSGRP00000035466	ENSSGRP00000100179	Protein FAM19A2-like.	annotation not available	0.489
ENSSGRP00000035466	ENSSGRP00000101767	ENSSGRP00000035466	ENSSGRP00000101767	Protein FAM19A2-like.	Neurexophilin 2a.	0.503
ENSSGRP00000035466	ENSSGRP00000106624	ENSSGRP00000035466	ENSSGRP00000106624	Protein FAM19A2-like.	Neurexophilin-2-like isoform X1.	0.490
ENSSGRP00000035466	LOC107551792	ENSSGRP00000035466	ENSSGRP00000096322	Protein FAM19A2-like.	Neurexophilin-2-like.	0.504
ENSSGRP00000035466	LOC107572939	ENSSGRP00000035466	ENSSGRP00000009690	Protein FAM19A2-like.	Neurexophilin-2-like.	0.507
ENSSGRP00000056911	ENSSGRP00000004886	ENSSGRP00000056911	ENSSGRP00000004886	Si:ch211-254n4.3.	annotation not available	0.456
ENSSGRP00000056911	ENSSGRP00000100179	ENSSGRP00000056911	ENSSGRP00000100179	Si:ch211-254n4.3.	annotation not available	0.495