STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107553747RNA-binding protein MEX3B-like. (518 aa)    
Predicted Functional Partners:
ENSSGRP00000054852
Serine/arginine repetitive matrix 4.
    
 0.646
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.588
ift52
Intraflagellar transport protein 52 homolog.
    
 0.552
LOC107560007
Snurportin-1-like isoform X1.
    
 
 0.543
ENSSGRP00000088582
annotation not available
    
 
 0.543
irak1
Interleukin-1 receptor-associated kinase 1 isoform X1.
    
 0.536
ENSSGRP00000064951
Interleukin-1 receptor-associated kinase 1.
    
 0.536
LOC107587352
Intraflagellar transport protein 22 homolog isoform X1.
    
 0.468
ENSSGRP00000026667
Intraflagellar transport protein 22 homolog.
    
 0.468
ENSSGRP00000072410
Intraflagellar transport protein 88 homolog.
   
 0.468
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.