STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107597115Smad nuclear-interacting protein 1-like. (371 aa)    
Predicted Functional Partners:
ENSSGRP00000093322
RNA-binding motif protein, X-linked 2-like.
   
 0.996
LOC107587203
RNA-binding motif protein, X-linked 2-like isoform X1.
   
 0.996
ENSSGRP00000000245
Splicing factor 3a, subunit 2.
    
 
 0.986
SNW1
SNW domain-containing protein 1.
    
 
 0.985
ENSSGRP00000108934
SNW domain containing 1.
    
 
 0.985
ENSSGRP00000000181
annotation not available
   
 0.982
ENSSGRP00000026928
BUD13 homolog.
   
 0.982
ENSSGRP00000046032
annotation not available
   
 0.982
LOC107552258-2
U6 snRNA-associated Sm-like protein LSm2.
    
  0.980
LOC107592276
Protein CWC15 homolog.
   
 
 0.980
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.