STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005149Annexin A5-like. (300 aa)    
Predicted Functional Partners:
rpap2
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1.
   
 
 0.425
ENSSGRP00000017557
Caveolin-3-like.
   
 
 0.420
ENSSGRP00000039326
annotation not available
   
 
 0.413
WDR1
WD repeat domain 1.
   
 
 0.413
ENSSGRP00000070905
Dysferlin-like.
    
 0.409
ENSSGRP00000084704
Dysferlin-like.
    
 0.409
ENSSGRP00000027385
Trio Rho guanine nucleotide exchange factor b.
    
  0.407
ENSSGRP00000061554
annotation not available
    
  0.407
ENSSGRP00000069905
Triple functional domain protein-like.
    
  0.407
ENSSGRP00000082987
Trio Rho guanine nucleotide exchange factor a.
    
  0.407
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.