STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005327Vacuolar protein sorting-associated protein 37B-like. (212 aa)    
Predicted Functional Partners:
LOC107592928
Vacuolar protein sorting-associated protein 28 homolog isoform X1.
   
 0.974
LOC107591969
Vacuolar protein sorting-associated protein 28 homolog isoform X1.
   
 0.974
ENSSGRP00000035740
Multivesicular body subunit 12A-like.
   
 0.962
ENSSGRP00000069590
annotation not available
   
 0.962
ENSSGRP00000008575
Multivesicular body subunit 12Ba.
   
 0.942
ENSSGRP00000042808
Multivesicular body subunit 12B-like.
   
 0.942
LOC107591487
Multivesicular body subunit 12B-like isoform X1.
   
 0.942
Vps25
Vacuolar protein-sorting-associated protein 25.
    
 0.913
ENSSGRP00000002474
Tumor susceptibility gene 101 protein-like.
   
 0.901
Tsg101
Tumor susceptibility gene 101 protein.
   
 0.901
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.