STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005346Large subunit ribosomal protein L17e. (117 aa)    
Predicted Functional Partners:
LOC107552847
Small subunit ribosomal protein S9e.
  
 
 0.999
LOC107567735
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.999
FAU
Small subunit ribosomal protein S30e.
   
 0.999
rps29
Small subunit ribosomal protein S29e.
  
 
 0.999
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.999
RPS15
Ribosomal protein S15.
  
 
 0.999
LOC107577535
Large subunit ribosomal protein L36e.
   
 0.999
ENSSGRP00000004833
annotation not available
   
 0.999
LOC107579695
40S ribosomal protein S20-like.
  
 
 0.999
ENSSGRP00000005414
annotation not available
   
 0.999
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.