STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005355annotation not available (548 aa)    
Predicted Functional Partners:
Znf511
Zinc finger protein 511.
      
 0.627
LOC107553352
Dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP).
   
 
 0.580
ENSSGRP00000093250
annotation not available
   
 
 0.580
ND4
NADH-ubiquinone oxidoreductase chain 4.
    
 
 0.549
rtcb
TRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase).
    
 0.535
mrpl16
39S ribosomal protein L16, mitochondrial isoform X1.
   
 
 0.528
mrpl15
39S ribosomal protein L15, mitochondrial.
   
 
 0.521
Mrps10
28S ribosomal protein S10, mitochondrial.
    
 
 0.520
ENSSGRP00000007976
annotation not available
      
 0.510
ENSSGRP00000028857
annotation not available
      
 0.510
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.