STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005372annotation not available (162 aa)    
Predicted Functional Partners:
ENSSGRP00000020939
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 
 0.987
Rev3l
DNA polymerase zeta catalytic subunit.
    
 0.982
ENSSGRP00000049678
annotation not available
    
 0.982
rev1
DNA repair protein REV1.
   
 0.982
ENSSGRP00000098764
DNA repair protein REV1-like.
   
 0.982
Poli
DNA polymerase iota.
   
 0.967
LOC107573342
Uncharacterized protein LOC107573342.
    
 
 0.956
ENSSGRP00000101202
annotation not available
    
 
 0.943
ENSSGRP00000101205
Protein FAM35A-like.
    
 
 0.943
ENSSGRP00000009576
annotation not available
   
 0.931
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.