STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005555Nucleotide exchange factor SIL1-like. (289 aa)    
Predicted Functional Partners:
FAU
Small subunit ribosomal protein S30e.
   
 0.998
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.998
LOC107567395
Small subunit ribosomal protein S30e.
   
 0.998
LOC107555153
Small subunit ribosomal protein S30e.
   
 0.998
LOC107599340
39S ribosomal protein L12, mitochondrial-like.
  
 
 0.992
Mrpl21
39S ribosomal protein L21, mitochondrial.
   
 0.992
Pdcd11
RRNA biogenesis protein RRP5.
  
 
 0.988
ENSSGRP00000084072
Large subunit ribosomal protein L23Ae.
  
 0.988
rpl23a
Large subunit ribosomal protein L23Ae.
  
 0.988
ENSSGRP00000051201
Ribosomal protein L15.
   
 0.986
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.