STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005585annotation not available (256 aa)    
Predicted Functional Partners:
FAU
Small subunit ribosomal protein S30e.
    
 0.979
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
    
 0.979
LOC107567395
Small subunit ribosomal protein S30e.
    
 0.979
LOC107555153
Small subunit ribosomal protein S30e.
    
 0.979
commd2
COMM domain-containing protein 2 isoform X1.
    
 0.908
commd10
COMM domain-containing protein 10.
   
 0.891
ENSSGRP00000083272
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.859
ENSSGRP00000106616
annotation not available
    
  0.859
LOC107549111
Small subunit ribosomal protein S7e.
    
 
 0.847
LOC107598557
COMM domain-containing protein 1-like.
    
 0.838
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.