STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005601Sorting nexin-24-like. (146 aa)    
Predicted Functional Partners:
LOC107550582
GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1.
    
 
 0.586
ENSSGRP00000073287
GTPase-activating protein and VPS9 domain-containing protein 1-like.
    
 
 0.586
ENSSGRP00000007985
annotation not available
    
   0.543
LOC107560022
Sorting nexin-24-like.
    
  
0.543
ENSSGRP00000085186
Sorting nexin-24-like.
    
   0.543
PPIC
Peptidyl-prolyl cis-trans isomerase C-like isoform X1.
      
 0.521
LOC107554841
Casein kinase I.
    
   0.502
LOC107554841-2
Casein kinase I isoform X1.
    
   0.502
ENSSGRP00000005650
Bcl-2-like 1 (apoptosis regulator Bcl-X).
      
 0.493
LOC107560925
Bcl-2-like 1 (apoptosis regulator Bcl-X).
      
 0.493
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.