STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107599799Torsin-1A-like. (367 aa)    
Predicted Functional Partners:
LOC107585887
Torsin-1A-interacting protein 2-like isoform X1.
   
 
 0.659
ENSSGRP00000031493
Torsin-1A-interacting protein 2-like.
   
 
 0.659
ENSSGRP00000031497
Zgc:112962.
   
 
 0.659
ENSSGRP00000113038
annotation not available
      
 0.652
ENSSGRP00000058693
Oligosaccharide translocation protein RFT1.
      
 0.648
ENSSGRP00000061060
Oligosaccharide translocation protein RFT1.
      
 0.648
LOC107581188
28S ribosomal protein S18a, mitochondrial-like.
      
 0.645
LOC107583989
28S ribosomal protein S18a, mitochondrial-like.
      
 0.645
ENSSGRP00000033491
RNA binding protein, mRNA processing factor.
      
 0.630
ENSSGRP00000008315
Centrosome-associated protein 350-like.
      
 0.620
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.