STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005697Long-chain-fatty-acid--CoA ligase ACSBG1-like. (114 aa)    
Predicted Functional Partners:
LOC107599945
Cellular tumor antigen p53.
   
 0.738
LOC107592291
Cellular tumor antigen p53-like.
   
 0.738
acox1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
  
 0.737
ENSSGRP00000009075
Peroxisomal multifunctional enzyme type 2-like isoform X1.
  
 
 0.718
Atm
Serine-protein kinase ATM.
   
 0.654
ENSSGRP00000109741
Sterol carrier protein 2a.
  
 
 0.653
ENSSGRP00000111100
Sterol carrier protein 2b.
  
 
 0.653
Aasdh
Acyl-CoA synthetase family member 4 isoform X1.
     
 0.652
ENSSGRP00000041925
Damage-specific DNA binding protein 1.
    
 
 0.644
LOC107550884
Malate synthase, glyoxysomal-like.
   
  
 0.636
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.