STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005870annotation not available (192 aa)    
Predicted Functional Partners:
ENSSGRP00000023496
Beclin-1.
    
 0.935
LOC107562280
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.865
LOC107588167
Phosphatidylinositol 3-kinase catalytic subunit type 3-like isoform X1.
    
 0.865
LOC107554630
Autophagy-related protein 13-like.
   
 0.849
ENSSGRP00000103672
ATG13 autophagy related 13 homolog (S. cerevisiae).
   
 0.849
LOC107554713
RB1-inducible coiled-coil protein 1-like isoform X1.
    
 0.843
LOC107599672
RB1-inducible coiled-coil protein 1-like.
    
 0.843
ENSSGRP00000019254
annotation not available
    
 0.821
LOC107588487
Phosphoinositide 3-kinase regulatory subunit 4-like.
    
 0.821
ENSSGRP00000070644
Phosphoinositide 3-kinase regulatory subunit 4-like isoform X1.
    
 0.821
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.