Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000005877annotation not available (175 aa)    
Predicted Functional Partners:
ENSSGRP00000099209
Tetratricopeptide repeat domain 12.
      
 0.609
Dhx40
Probable ATP-dependent RNA helicase DHX40.
      
 0.581
ENSSGRP00000022219
Phosphotriesterase related.
      
 0.505
ENSSGRP00000043352
Phosphotriesterase related.
      
 0.505
ENSSGRP00000000900
Mesoderm specific transcript.
      
 0.490
Mest
Mesoderm-specific transcript homolog protein.
      
 0.490
ENSSGRP00000010790
annotation not available
      
 0.486
ENSSGRP00000076048
PITPNM family member 3.
      
 0.486
LOC107600342
Paraplegin-like isoform X1.
      
 0.441
LOC107564324
Phosphatidylcholine-retinol O-acyltransferase.
      
 0.441
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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