STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107555896AT-rich interactive domain-containing protein 2-like isoform X1. (1605 aa)    
Predicted Functional Partners:
LOC107551488
Bromodomain-containing protein 7-like isoform X1.
   
 
 0.964
ENSSGRP00000079194
Bromodomain containing 7.
   
 
 0.964
LOC107601252
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
   
 
 0.961
LOC107590406
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
   
 
 0.961
ENSSGRP00000005340
annotation not available
   
 
 0.957
LOC107572403
Protein polybromo-1-like.
   
 
 0.957
ENSSGRP00000042593
Protein polybromo-1-like.
   
 
 0.957
LOC107555971
Protein polybromo-1-like isoform X1.
   
 
 0.957
ENSSGRP00000076303
Polybromo 1, like.
   
 
 0.957
phf10
PHD finger protein 10 isoform X1.
    
 
 0.936
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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