STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107579838Syntenin-1-like. (136 aa)    
Predicted Functional Partners:
LOC107591619
Programmed cell death 6-interacting protein-like isoform X1.
    
 0.788
LOC107593555
Programmed cell death 6-interacting protein-like isoform X1.
    
 0.788
LOC107587566
Syndecan-4-like.
   
 
 0.681
LOC107595421
Syndecan-4-like.
   
 
 0.681
ift52
Intraflagellar transport protein 52 homolog.
    
 0.638
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.631
LOC107565944
Calcium/calmodulin-dependent serine protein kinase.
   
 0.621
ENSSGRP00000059550
Calcium/calmodulin-dependent serine protein kinase.
   
 0.619
ENSSGRP00000064648
Calcium/calmodulin-dependent serine protein kinase b.
   
 0.619
ENSSGRP00000096002
Peripheral plasma membrane protein CASK-like.
   
 0.619
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.