STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000006288Double-stranded RNA-specific editase 1-like. (701 aa)    
Predicted Functional Partners:
adal
Adenosine deaminase-like protein isoform X1.
      
 0.567
ENSSGRP00000044879
Tripartite motif containing 107.
      
 0.511
LOC107581841
Monocyte chemotactic protein 1B-like.
      
 0.511
LOC107597966
Transcription intermediary factor 1-alpha-like isoform X1.
      
 0.511
ENSSGRP00000056848
Putative helicase mov-10-B.2.
    
 
 0.454
LOC107553463
TRNA-specific adenosine deaminase 2.
      
 0.450
ENSSGRP00000067259
Adenosine deaminase tRNA specific 2.
      
 0.450
LOC107553781
Interleukin-8-like.
      
 0.444
LOC107565014
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
      
 0.444
LOC107602133
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
      
 0.444
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.