STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000006449annotation not available (61 aa)    
Predicted Functional Partners:
LOC107589327
COP9 signalosome complex subunit 2.
   
  0.747
ENSSGRP00000016466
COP9 signalosome subunit 3.
    
 0.698
cops3
COP9 signalosome complex subunit 3.
    
 0.698
COPS6
COP9 signalosome complex subunit 6.
    
  0.692
LOC107590195
COP9 signalosome complex subunit 5.
    
  0.679
ENSSGRP00000104189
COP9 signalosome subunit 5.
    
  0.679
LOC107573626
Cullin-3-B-like.
   
 0.665
LOC107551306
Cullin 3.
   
 0.665
ENSSGRP00000060541
Cullin-3-like.
   
 0.665
LOC107567698
Cullin-3-B-like isoform X1.
   
 0.665
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.