STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107581521Presqualene diphosphate phosphatase. (282 aa)    
Predicted Functional Partners:
LOC107586636
Erythroid differentiation-related factor 1-like.
      
 0.624
LOC107593955
G-protein coupled receptor 182-like.
      
 0.613
LOC107599064
G-protein coupled receptor 182-like.
      
 0.613
ENSSGRP00000004554
annotation not available
      
 0.521
eef1aknmt
Methyltransferase-like protein 13.
      
 0.521
ENSSGRP00000069251
Methyltransferase like 13.
      
 0.521
LOC107566310
Myosin light chain kinase, smooth muscle-like.
      
 0.520
LOC107555454
Myosin light chain kinase, smooth muscle-like.
      
 0.520
ENSSGRP00000036222
annotation not available
      
 0.520
ENSSGRP00000080186
annotation not available
      
 0.520
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.