STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107580248Synaptojanin-2-binding protein-like. (145 aa)    
Predicted Functional Partners:
ENSSGRP00000059746
annotation not available
    
 0.872
ATAD3A
ATPase family AAA domain-containing protein 3-like.
   
 
 0.650
ift52
Intraflagellar transport protein 52 homolog.
    
 0.638
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.631
ENSSGRP00000058519
Cytochrome P450 family 20 subfamily A.
      
 0.624
LOC107566989
Intraflagellar transport protein 57 homolog.
    
 0.606
LOC107602615
Intraflagellar transport protein 57 homolog.
    
 0.606
ENSSGRP00000005445
Intraflagellar transport protein 80 homolog.
    
 0.605
ENSSGRP00000034071
Intraflagellar transport protein 80 homolog.
    
 0.605
ift172
Intraflagellar transport protein 172 homolog.
    
 0.603
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.