STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000006563Contactin-associated protein-like 4. (111 aa)    
Predicted Functional Partners:
wars1
Tryptophan--tRNA ligase, cytoplasmic isoform X1.
      
 0.502
ENSSGRP00000081648
Contactin-2-like isoform X1.
   
 0.457
ENSSGRP00000104980
Contactin-2-like.
   
 0.457
LOC107564623
V(D)J recombination-activating protein 2-like.
  
     0.435
LOC107581808
V(D)J recombination-activating protein 2.
  
     0.435
LOC107564622
V(D)J recombination-activating protein 2-like.
  
     0.434
p2ry10
Putative P2Y purinoceptor 10.
  
     0.429
TCIM
Protein C8orf4 homolog.
  
     0.418
LOC107581848
Contactin-1-like.
   
 0.415
ENSSGRP00000003858
Contactin-1a-like.
   
 0.415
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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