STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107580262Histone H1.4-like. (173 aa)    
Predicted Functional Partners:
LOC107560265
Beta-2-microglobulin.
    
 0.672
LOC107587133
Beta-2-microglobulin-like.
    
 0.672
ENSSGRP00000107258
Uncharacterized protein LOC107562773.
      
 0.652
ENSSGRP00000040762
CST complex subunit STN1-like.
    
 0.624
ENSSGRP00000048610
CST complex subunit STN1-like.
    
 0.624
ENSSGRP00000052373
SAS-6 centriolar assembly protein.
    
 0.624
LOC107562648
Beta-2-microglobulin-like.
    
 0.624
sass6
Spindle assembly abnormal protein 6 homolog.
    
 0.624
Rpa2
Replication protein A 32 kDa subunit isoform X1.
    
 0.624
LOC107553162
Beta-2-microglobulin-like.
    
 0.624
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.