STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000006720Nuclear distribution protein nudE homolog 1-A-like. (213 aa)    
Predicted Functional Partners:
ENSSGRP00000049876
Nuclear migration protein nudC-like.
     
 0.793
LOC107550646
Nuclear migration protein nudC-like.
     
 0.793
ENSSGRP00000085366
Methyltransferase-like protein 16.
    
 
 0.755
LOC107581938
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 
 0.755
LOC107592620
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 
 0.755
LOC107587218
Platelet-activating factor acetylhydrolase IB subunit alpha.
    
 
 0.755
ENSSGRP00000055045
Disrupted in schizophrenia 1 protein-like.
    
 
 0.735
LOC107557735
Disrupted in schizophrenia 1 protein-like isoform X1.
    
 
 0.735
ENSSGRP00000098398
TBC1 domain family member 31-like.
    
 
 0.708
ENSSGRP00000029391
NudC domain-containing protein 3-like.
     
 0.655
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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