STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000006790DNA mismatch repair protein MSH5. (138 aa)    
Predicted Functional Partners:
ENSSGRP00000044741
mutS homolog 4.
   
 0.996
mlh1
DNA mismatch repair protein MLH1.
  
 0.938
PMS2
PMS1 homolog 2, mismatch repair system component.
  
 0.931
LOC107594169
Mismatch repair endonuclease PMS2-like.
  
 0.931
LOC107565013
DNA mismatch repair protein PMS1.
  
 0.931
LOC107602147
PMS1 protein homolog 1-like isoform X1.
  
 0.931
ENSSGRP00000017699
Proliferating cell nuclear antigen.
   
 0.919
LOC107583397
Proliferating cell nuclear antigen.
   
 0.919
ENSSGRP00000000137
DNA mismatch repair protein Mlh3-like isoform X1.
  
 0.915
ENSSGRP00000024222
mutL homolog 3 (E. coli).
  
 0.915
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.