STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000006828[histone H3]-lysine4 N-trimethyltransferase ASH1L. (67 aa)    
Predicted Functional Partners:
USP34
Ubiquitin carboxyl-terminal hydrolase 34-like.
   
 
 0.866
LOC107583909
Mortality factor 4-like protein 1.
   
 
 0.834
LOC107596963
Mortality factor 4-like protein 1.
   
 
 0.834
ENSSGRP00000087320
AT-rich interactive domain-containing protein 4B-like.
   
 
 0.755
ENSSGRP00000010025
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
   
  
 0.721
SETD2
Histone-lysine N-methyltransferase SETD2-like.
   
  
 0.721
LOC107602502
Calmodulin-lysine N-methyltransferase-like isoform X1.
     
 0.705
eed
Polycomb protein EED.
    
 0.686
ENSSGRP00000018095
Polycomb protein eed-like.
    
 0.686
ENSSGRP00000059199
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1-like.
    
  0.663
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.