STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107578795Proprotein convertase subtilisin/kexin type 9-like. (541 aa)    
Predicted Functional Partners:
ENSSGRP00000032234
Very low-density lipoprotein receptor-like.
    
 0.854
ENSSGRP00000035357
annotation not available
    
 0.854
ldlr
Low-density lipoprotein receptor isoform X1.
    
 0.854
LOC107548665
Very low-density lipoprotein receptor-like isoform X1.
    
 0.854
ENSSGRP00000006861
Low density lipoprotein receptor b.
    
 0.843
LOC107594600
Low-density lipoprotein receptor-related protein 8-like isoform X1.
    
 0.835
ENSSGRP00000113060
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
    
 0.835
ENSSGRP00000058775
annotation not available
    
 0.827
ENSSGRP00000109654
annotation not available
    
 0.827
ENSSGRP00000109655
Low-density lipoprotein receptor-related protein 8-like.
    
 0.827
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.