STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPACCAAT/enhancer binding protein (C/EBP), alpha. (286 aa)    
Predicted Functional Partners:
LOC107556312
CCAAT/enhancer binding protein (C/EBP), beta.
   
0.778
ENSSGRP00000022639
Cyclin-dependent kinase 4.
    
 0.771
LOC107567936
Cyclin-dependent kinase 4-like isoform X1.
    
 0.771
LOC107570445
Cyclin-dependent kinase 2.
    
 0.771
LOC107562245
Cyclin-dependent kinase 2-like.
    
 0.771
COX2
Cytochrome c oxidase subunit II.
    
 0.758
PPARG
Peroxisome proliferator-activated receptor gamma-like.
   
 0.746
PPARG-2
Peroxisome proliferator activated receptor gamma.
   
 0.746
LOC107554898
Transcription factor PU.1-like isoform X1.
   
 0.742
ENSSGRP00000068306
Transcription factor PU.1-like.
   
 0.742
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.