STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP0000000732839S ribosomal protein L28, mitochondrial-like. (189 aa)    
Predicted Functional Partners:
mrpl16
39S ribosomal protein L16, mitochondrial isoform X1.
   
 0.941
LOC107553677
Growth arrest and DNA damage-inducible proteins-interacting protein 1-like.
   
   0.933
mrpl3
39S ribosomal protein L3, mitochondrial isoform X1.
   
 
 0.927
LOC107599340
39S ribosomal protein L12, mitochondrial-like.
   
 
 0.924
ENSSGRP00000079041
Mitochondrial ribosomal protein L39.
    
 
 0.917
mrpl58
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
   0.915
ENSSGRP00000016671
39S ribosomal protein L4, mitochondrial.
   
 
 0.913
ENSSGRP00000102115
Mitochondrial ribosomal protein L4.
   
 
 0.913
mrpl15
39S ribosomal protein L15, mitochondrial.
   
   0.911
mrpl37
39S ribosomal protein L37, mitochondrial.
   
   0.909
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.