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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007331annotation not available (38 aa)    
Predicted Functional Partners:
ENSSGRP00000051201
Ribosomal protein L15.
   
 0.985
ENSSGRP00000005346
Large subunit ribosomal protein L17e.
   
 0.981
RPL38
Ribosomal protein L38.
   
 0.979
ENSSGRP00000030573
Ribosomal protein L38.
   
 0.979
rpl29
Large subunit ribosomal protein L29e.
   
 0.978
ENSSGRP00000095976
annotation not available
   
 0.978
FAU
Small subunit ribosomal protein S30e.
   
 0.977
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
 0.977
LOC107589447
Large subunit ribosomal protein L11e.
   
 0.977
LOC107583572
Large subunit ribosomal protein L13Ae.
   
 0.977
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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