STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (713 aa)    
Predicted Functional Partners:
ENSSGRP00000017116
Small nuclear ribonucleoprotein 35 (U11/U12).
   
 0.731
ENSSGRP00000056884
U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like.
   
 0.731
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
     
 0.720
LOC107599446
Heterogeneous nuclear ribonucleoprotein M-like isoform X1.
   
 0.680
ENSSGRP00000108454
Heterogeneous nuclear ribonucleoprotein M.
   
 0.680
LOC107554282
Serine/arginine-rich splicing factor 1A.
   
 0.669
LOC107582602
Serine/arginine-rich splicing factor 1A-like.
   
 0.669
ENSSGRP00000109055
Serine/arginine-rich splicing factor 1B.
   
 0.669
ENSSGRP00000005401
annotation not available
   
 0.652
ENSSGRP00000015435
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.652
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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