STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107580423Forkhead box protein I1-like. (344 aa)    
Predicted Functional Partners:
CPSF4
Cleavage and polyadenylation specificity factor subunit 4.
    
 
 0.629
LOC107592759
Cleavage and polyadenylation specificity factor subunit 4-like.
    
 
 0.629
LOC107564268
Sodium/potassium-transporting ATPase subunit beta-233-like.
      
 0.627
ENSSGRP00000035841
Sodium/potassium-transporting ATPase subunit beta-233-like.
      
 0.627
GCM2
Chorion-specific transcription factor GCMb.
   
 
 0.546
LOC107552658
Chorion-specific transcription factor GCMb-like.
   
 
 0.546
LOC107574491
Tumor protein 63-like isoform X1.
    
 0.539
ENSSGRP00000034526
Tumor protein 63-like isoform X1.
    
 0.539
ENSSGRP00000003712
Si:dkey-33i11.4.
      
 0.520
ENSSGRP00000093843
Sodium/potassium-transporting ATPase subunit alpha-1-like.
      
 0.507
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.